Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SNX31Q8N9S9 AC092053.2-201ENST00000640557 1818 ntBASIC21.32■■□□□ 1
SNX31Q8N9S9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SNX31Q8N9S9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SNX31Q8N9S9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.31■■□□□ 1
SNX31Q8N9S9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.31■■□□□ 1
SNX31Q8N9S9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.31■■□□□ 1
SNX31Q8N9S9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX31Q8N9S9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SNX31Q8N9S9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.3■■□□□ 1
SNX31Q8N9S9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.3■■□□□ 1
SNX31Q8N9S9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNX31Q8N9S9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SNX31Q8N9S9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 AC133637.1-201ENST00000624115 1537 ntBASIC21.29■■□□□ 1
SNX31Q8N9S9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SNX31Q8N9S9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.29■■□□□ 1
SNX31Q8N9S9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNX31Q8N9S9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.29■■□□□ 1
SNX31Q8N9S9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.28■■□□□ 1
SNX31Q8N9S9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SNX31Q8N9S9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SNX31Q8N9S9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.28■■□□□ 1
SNX31Q8N9S9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SNX31Q8N9S9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.28■■□□□ 1
SNX31Q8N9S9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.28■■□□□ 1
SNX31Q8N9S9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX31Q8N9S9 AL024507.2-201ENST00000606070 2574 ntBASIC21.28■■□□□ 1
SNX31Q8N9S9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.28■■□□□ 1
SNX31Q8N9S9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.27■■□□□ 1
SNX31Q8N9S9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.27■■□□□ 1
SNX31Q8N9S9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.27■■□□□ 1
SNX31Q8N9S9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNX31Q8N9S9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.27■■□□□ 1
SNX31Q8N9S9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNX31Q8N9S9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNX31Q8N9S9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 MIR3181-201ENST00000578512 73 ntBASIC21.26■□□□□ 0.99
SNX31Q8N9S9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 MIR4466-201ENST00000606121 54 ntBASIC21.26■□□□□ 0.99
SNX31Q8N9S9 AC092171.4-201ENST00000609130 632 ntBASIC21.26■□□□□ 0.99
SNX31Q8N9S9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX31Q8N9S9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX31Q8N9S9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX31Q8N9S9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SNX31Q8N9S9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX31Q8N9S9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.25■□□□□ 0.99
SNX31Q8N9S9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms