Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 AC026310.3-201ENST00000625186 2373 ntBASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
EFCAB3Q8N7B9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCAB3Q8N7B9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCAB3Q8N7B9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
EFCAB3Q8N7B9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EFCAB3Q8N7B9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.33■■□□□ 1
EFCAB3Q8N7B9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
EFCAB3Q8N7B9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EFCAB3Q8N7B9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 EDA-201ENST00000338901 1233 ntBASIC21.32■■□□□ 1
EFCAB3Q8N7B9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.32■■□□□ 1
EFCAB3Q8N7B9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.32■■□□□ 1
EFCAB3Q8N7B9 AL355001.2-201ENST00000620617 1191 ntBASIC21.32■■□□□ 1
EFCAB3Q8N7B9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
EFCAB3Q8N7B9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCAB3Q8N7B9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 SUDS3P1-201ENST00000505831 966 ntBASIC21.3■■□□□ 1
EFCAB3Q8N7B9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCAB3Q8N7B9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
EFCAB3Q8N7B9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms