Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TTC9BQ8N6N2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.87■■□□□ 1.25
TTC9BQ8N6N2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 AC005224.4-201ENST00000583262 1652 ntBASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TTC9BQ8N6N2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 AC079089.2-201ENST00000531211 1277 ntBASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TTC9BQ8N6N2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 AC079140.4-201ENST00000507448 529 ntBASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TTC9BQ8N6N2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 AC006015.1-201ENST00000429970 570 ntBASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 AC137761.2-201ENST00000561729 223 ntBASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 AC145350.3-201ENST00000569033 163 ntBASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TTC9BQ8N6N2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.83■■□□□ 1.24
TTC9BQ8N6N2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
TTC9BQ8N6N2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TTC9BQ8N6N2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.83■■□□□ 1.24
TTC9BQ8N6N2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TTC9BQ8N6N2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 AC087742.1-201ENST00000575880 1738 ntBASIC22.82■■□□□ 1.24
TTC9BQ8N6N2 LINC00526-201ENST00000581067 1875 ntBASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TTC9BQ8N6N2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TTC9BQ8N6N2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
TTC9BQ8N6N2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms