Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COMMD1Q8N668 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 AL136116.3-201ENST00000402907 1138 ntBASIC17.87■□□□□ 0.45
COMMD1Q8N668 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COMMD1Q8N668 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.87■□□□□ 0.45
COMMD1Q8N668 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COMMD1Q8N668 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COMMD1Q8N668 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COMMD1Q8N668 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.86■□□□□ 0.45
COMMD1Q8N668 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COMMD1Q8N668 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.85■□□□□ 0.45
COMMD1Q8N668 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 AL512631.2-201ENST00000604634 923 ntBASIC17.84■□□□□ 0.45
COMMD1Q8N668 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COMMD1Q8N668 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COMMD1Q8N668 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD1Q8N668 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
COMMD1Q8N668 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
COMMD1Q8N668 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD1Q8N668 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD1Q8N668 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COMMD1Q8N668 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
COMMD1Q8N668 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.83■□□□□ 0.44
COMMD1Q8N668 SRD5A1P1-201ENST00000442297 786 ntBASIC17.83■□□□□ 0.44
COMMD1Q8N668 AC092171.4-201ENST00000609130 632 ntBASIC17.83■□□□□ 0.44
COMMD1Q8N668 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COMMD1Q8N668 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.83■□□□□ 0.44
COMMD1Q8N668 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COMMD1Q8N668 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COMMD1Q8N668 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COMMD1Q8N668 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms