Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01561Q8N1V8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01561Q8N1V8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01561Q8N1V8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01561Q8N1V8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 AC104564.3-201ENST00000582367 638 ntBASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01561Q8N1V8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 AC079089.2-201ENST00000531211 1277 ntBASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 Z92544.1-202ENST00000571933 1220 ntBASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 AC068587.7-201ENST00000641602 218 ntBASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01561Q8N1V8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 MTDHP2-201ENST00000601468 714 ntBASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 AL031602.1-201ENST00000633169 911 ntBASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01561Q8N1V8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 KRT8P33-201ENST00000508125 1423 ntBASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 KRT125P-201ENST00000546827 989 ntBASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 AC241377.3-202ENST00000626088 1088 ntBASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 AC241585.3-202ENST00000628937 1088 ntBASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 AC245100.8-202ENST00000629247 1058 ntBASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01561Q8N1V8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01561Q8N1V8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms