Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 AC080038.1-201ENST00000611274 1154 ntBASIC22.11■■□□□ 1.13
CHPFQ8IZ52 DUSP8P3-201ENST00000399571 1760 ntBASIC22.11■■□□□ 1.13
CHPFQ8IZ52 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 ANOS2P-203ENST00000472227 1816 ntBASIC22.1■■□□□ 1.13
CHPFQ8IZ52 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 ID1-201ENST00000376105 1233 ntBASIC22.1■■□□□ 1.13
CHPFQ8IZ52 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHPFQ8IZ52 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 KRT19P1-201ENST00000405746 1186 ntBASIC22.09■■□□□ 1.13
CHPFQ8IZ52 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHPFQ8IZ52 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 AC079140.4-201ENST00000507448 529 ntBASIC22.08■■□□□ 1.13
CHPFQ8IZ52 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.08■■□□□ 1.13
CHPFQ8IZ52 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CHPFQ8IZ52 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CHPFQ8IZ52 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.07■■□□□ 1.12
CHPFQ8IZ52 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.06■■□□□ 1.12
CHPFQ8IZ52 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHPFQ8IZ52 AC012676.1-201ENST00000574705 1949 ntBASIC22.06■■□□□ 1.12
CHPFQ8IZ52 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 AC092068.2-201ENST00000590491 1708 ntBASIC22.05■■□□□ 1.12
CHPFQ8IZ52 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.05■■□□□ 1.12
CHPFQ8IZ52 AC068473.5-201ENST00000616428 2072 ntBASIC22.05■■□□□ 1.12
CHPFQ8IZ52 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms