Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
ZNF440Q8IYI8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF440Q8IYI8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF440Q8IYI8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF440Q8IYI8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF440Q8IYI8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF440Q8IYI8 OXCT2P1-201ENST00000447263 1535 ntBASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 UNC93B3-201ENST00000308076 687 ntBASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 LINC00565-201ENST00000562710 2331 ntBASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF440Q8IYI8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF440Q8IYI8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 BX842568.3-201ENST00000418104 571 ntBASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 AL136162.1-201ENST00000607711 1078 ntBASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF440Q8IYI8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 MIR4767-201ENST00000582827 78 ntBASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF440Q8IYI8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF440Q8IYI8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms