Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC28Q86X40 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRRC28Q86X40 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC28Q86X40 AC008406.3-201ENST00000620001 1374 ntBASIC19.2■□□□□ 0.66
LRRC28Q86X40 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC28Q86X40 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC28Q86X40 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC28Q86X40 AC005229.4-201ENST00000610085 2198 ntBASIC19.2■□□□□ 0.66
LRRC28Q86X40 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LRRC28Q86X40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC28Q86X40 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC28Q86X40 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC28Q86X40 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC28Q86X40 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC28Q86X40 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC28Q86X40 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC28Q86X40 AC005703.6-201ENST00000623265 1329 ntBASIC19.18■□□□□ 0.66
LRRC28Q86X40 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC28Q86X40 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC28Q86X40 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC28Q86X40 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC28Q86X40 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRRC28Q86X40 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC28Q86X40 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC28Q86X40 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC28Q86X40 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC28Q86X40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC28Q86X40 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRRC28Q86X40 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms