Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHFQ7M4L6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.53■□□□□ 0.72
SHFQ7M4L6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SHFQ7M4L6 AC004687.1-201ENST00000579003 1625 ntBASIC19.52■□□□□ 0.72
SHFQ7M4L6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SHFQ7M4L6 MTDHP2-201ENST00000601468 714 ntBASIC19.52■□□□□ 0.72
SHFQ7M4L6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHFQ7M4L6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHFQ7M4L6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
SHFQ7M4L6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SHFQ7M4L6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHFQ7M4L6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.51■□□□□ 0.71
SHFQ7M4L6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHFQ7M4L6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SHFQ7M4L6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.5■□□□□ 0.71
SHFQ7M4L6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SHFQ7M4L6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHFQ7M4L6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHFQ7M4L6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHFQ7M4L6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHFQ7M4L6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHFQ7M4L6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHFQ7M4L6 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
SHFQ7M4L6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.49■□□□□ 0.71
SHFQ7M4L6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
SHFQ7M4L6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHFQ7M4L6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SHFQ7M4L6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.47■□□□□ 0.71
SHFQ7M4L6 AF106564.1-201ENST00000607058 2553 ntBASIC19.47■□□□□ 0.71
SHFQ7M4L6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHFQ7M4L6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms