Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM53Q6P2H8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 MIR3621-201ENST00000580529 85 ntBASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM53Q6P2H8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM53Q6P2H8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM53Q6P2H8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM53Q6P2H8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM53Q6P2H8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.64■□□□□ 0.74
TMEM53Q6P2H8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TMEM53Q6P2H8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM53Q6P2H8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 AC009102.2-201ENST00000606772 1639 ntBASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 AC131212.1-201ENST00000613771 668 ntBASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM53Q6P2H8 ANOS2P-203ENST00000472227 1816 ntBASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms