Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 LINC00543-201ENST00000567234 1845 ntBASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 AC105036.2-201ENST00000569468 176 ntBASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13DQ5THJ4 OXCT2P1-201ENST00000447263 1535 ntBASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.78□□□□□ -0.04
VPS13DQ5THJ4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 AC093827.2-201ENST00000512654 315 ntBASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13DQ5THJ4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 AL121832.2-201ENST00000610979 668 ntBASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 ABCB10P4-201ENST00000566803 2184 ntBASIC14.77□□□□□ -0.05
VPS13DQ5THJ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 TSPY6P-201ENST00000448518 926 ntBASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 PRORSD1P-201ENST00000295112 541 ntBASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 AP001160.3-201ENST00000601484 763 ntBASIC14.76□□□□□ -0.05
VPS13DQ5THJ4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 SLC7A5P1-201ENST00000568957 537 ntBASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 RPS2P52-201ENST00000469610 820 ntBASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13DQ5THJ4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 AC087239.1-201ENST00000622671 572 ntBASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 GCSHP5-201ENST00000443090 522 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms