Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2D4BQ5SQS7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
SH2D4BQ5SQS7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 AC010542.4-201ENST00000563151 1910 ntBASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 BX664725.1-201ENST00000438252 379 ntBASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 FAM99A-202ENST00000538190 1989 ntBASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.35■■□□□ 1.01
SH2D4BQ5SQS7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 AC004687.1-201ENST00000579003 1625 ntBASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2D4BQ5SQS7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH2D4BQ5SQS7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1
SH2D4BQ5SQS7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 AC026310.3-201ENST00000625186 2373 ntBASIC21.32■■□□□ 1
SH2D4BQ5SQS7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2D4BQ5SQS7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 AL451085.2-201ENST00000605085 799 ntBASIC21.31■■□□□ 1
SH2D4BQ5SQS7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH2D4BQ5SQS7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SH2D4BQ5SQS7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms