Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL16A1Q07092 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL16A1Q07092 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC29.83■■■□□ 2.37
COL16A1Q07092 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.83■■■□□ 2.37
COL16A1Q07092 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
COL16A1Q07092 INO80E-214ENST00000620599 515 ntTSL 2 BASIC29.83■■■□□ 2.37
COL16A1Q07092 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.83■■■□□ 2.37
COL16A1Q07092 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
COL16A1Q07092 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL16A1Q07092 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
COL16A1Q07092 BX276092.2-201ENST00000417668 665 ntBASIC29.82■■■□□ 2.36
COL16A1Q07092 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
COL16A1Q07092 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC29.82■■■□□ 2.36
COL16A1Q07092 PLLP-204ENST00000569059 665 ntTSL 3 BASIC29.82■■■□□ 2.36
COL16A1Q07092 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC29.82■■■□□ 2.36
COL16A1Q07092 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.82■■■□□ 2.36
COL16A1Q07092 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
COL16A1Q07092 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC29.82■■■□□ 2.36
COL16A1Q07092 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC29.82■■■□□ 2.36
COL16A1Q07092 AC073648.6-201ENST00000641589 218 ntBASIC29.82■■■□□ 2.36
COL16A1Q07092 MME-217ENST00000616757 1315 ntTSL 5 BASIC29.82■■■□□ 2.36
COL16A1Q07092 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL16A1Q07092 AC009237.3-201ENST00000393279 1427 ntBASIC29.82■■■□□ 2.36
COL16A1Q07092 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL16A1Q07092 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL16A1Q07092 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL16A1Q07092 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.81■■■□□ 2.36
COL16A1Q07092 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
COL16A1Q07092 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC29.81■■■□□ 2.36
COL16A1Q07092 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.81■■■□□ 2.36
COL16A1Q07092 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
COL16A1Q07092 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC29.81■■■□□ 2.36
COL16A1Q07092 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
COL16A1Q07092 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
COL16A1Q07092 PEX7-202ENST00000367756 680 ntTSL 3 BASIC29.8■■■□□ 2.36
COL16A1Q07092 AC091874.3-201ENST00000512672 1195 ntBASIC29.8■■■□□ 2.36
COL16A1Q07092 UNC93B5-201ENST00000530315 699 ntBASIC29.8■■■□□ 2.36
COL16A1Q07092 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.8■■■□□ 2.36
COL16A1Q07092 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL16A1Q07092 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL16A1Q07092 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL16A1Q07092 OXCT2P1-201ENST00000447263 1535 ntBASIC29.8■■■□□ 2.36
COL16A1Q07092 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
COL16A1Q07092 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL16A1Q07092 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL16A1Q07092 AC026366.1-201ENST00000488803 879 ntBASIC29.79■■■□□ 2.36
COL16A1Q07092 AC138907.5-202ENST00000569484 235 ntBASIC29.79■■■□□ 2.36
COL16A1Q07092 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.79■■■□□ 2.36
COL16A1Q07092 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL16A1Q07092 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
COL16A1Q07092 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.78■■■□□ 2.36
COL16A1Q07092 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL16A1Q07092 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.78■■■□□ 2.36
COL16A1Q07092 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
COL16A1Q07092 GXYLT1P3-201ENST00000453058 1193 ntBASIC29.78■■■□□ 2.36
COL16A1Q07092 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.78■■■□□ 2.36
COL16A1Q07092 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC29.78■■■□□ 2.36
COL16A1Q07092 AP003097.1-201ENST00000530657 1135 ntBASIC29.78■■■□□ 2.36
COL16A1Q07092 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC29.78■■■□□ 2.36
COL16A1Q07092 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.78■■■□□ 2.36
COL16A1Q07092 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL16A1Q07092 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL16A1Q07092 MIR4497-201ENST00000583208 89 ntBASIC29.78■■■□□ 2.36
COL16A1Q07092 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC29.78■■■□□ 2.36
COL16A1Q07092 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC29.78■■■□□ 2.36
COL16A1Q07092 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC29.78■■■□□ 2.36
COL16A1Q07092 AL359736.2-201ENST00000621992 437 ntBASIC29.78■■■□□ 2.36
COL16A1Q07092 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL16A1Q07092 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL16A1Q07092 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
COL16A1Q07092 AL512625.2-201ENST00000417533 625 ntBASIC29.77■■■□□ 2.36
COL16A1Q07092 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC29.77■■■□□ 2.36
COL16A1Q07092 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC29.77■■■□□ 2.36
COL16A1Q07092 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC29.77■■■□□ 2.36
COL16A1Q07092 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC29.77■■■□□ 2.36
COL16A1Q07092 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL16A1Q07092 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL16A1Q07092 BMP1-204ENST00000397814 836 ntTSL 4 BASIC29.76■■■□□ 2.35
COL16A1Q07092 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC29.76■■■□□ 2.35
COL16A1Q07092 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL16A1Q07092 DUSP8P4-201ENST00000399538 1761 ntBASIC29.76■■■□□ 2.35
COL16A1Q07092 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL16A1Q07092 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.75■■■□□ 2.35
COL16A1Q07092 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.75■■■□□ 2.35
COL16A1Q07092 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL16A1Q07092 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.75■■■□□ 2.35
COL16A1Q07092 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC29.75■■■□□ 2.35
COL16A1Q07092 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.75■■■□□ 2.35
COL16A1Q07092 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL16A1Q07092 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
COL16A1Q07092 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.75■■■□□ 2.35
COL16A1Q07092 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL16A1Q07092 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC29.75■■■□□ 2.35
COL16A1Q07092 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL16A1Q07092 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC29.74■■■□□ 2.35
COL16A1Q07092 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
COL16A1Q07092 AC097658.1-201ENST00000475555 843 ntBASIC29.74■■■□□ 2.35
COL16A1Q07092 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL16A1Q07092 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.74■■■□□ 2.35
COL16A1Q07092 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms