Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRPXP78539 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRPXP78539 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SRPXP78539 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SRPXP78539 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRPXP78539 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.83■□□□□ 0.44
SRPXP78539 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.83■□□□□ 0.44
SRPXP78539 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRPXP78539 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.83■□□□□ 0.44
SRPXP78539 AC074183.2-201ENST00000623112 922 ntBASIC17.83■□□□□ 0.44
SRPXP78539 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRPXP78539 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRPXP78539 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SRPXP78539 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRPXP78539 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SRPXP78539 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRPXP78539 Z98882.1-201ENST00000622160 2253 ntBASIC17.82■□□□□ 0.44
SRPXP78539 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 KRT18P60-201ENST00000312876 1297 ntBASIC17.82■□□□□ 0.44
SRPXP78539 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.82■□□□□ 0.44
SRPXP78539 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SRPXP78539 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.82■□□□□ 0.44
SRPXP78539 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SRPXP78539 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRPXP78539 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.81■□□□□ 0.44
SRPXP78539 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.81■□□□□ 0.44
SRPXP78539 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 AC005703.6-201ENST00000623265 1329 ntBASIC17.81■□□□□ 0.44
SRPXP78539 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SRPXP78539 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.81■□□□□ 0.44
SRPXP78539 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.81■□□□□ 0.44
SRPXP78539 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRPXP78539 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRPXP78539 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.8■□□□□ 0.44
SRPXP78539 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 BHLHE23-202ENST00000612929 1109 ntBASIC17.8■□□□□ 0.44
SRPXP78539 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRPXP78539 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SRPXP78539 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.79■□□□□ 0.44
SRPXP78539 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.79■□□□□ 0.44
SRPXP78539 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.79■□□□□ 0.44
SRPXP78539 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRPXP78539 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 RARRES2P2-201ENST00000394842 485 ntBASIC17.79■□□□□ 0.44
SRPXP78539 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.79■□□□□ 0.44
SRPXP78539 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.79■□□□□ 0.44
SRPXP78539 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.79■□□□□ 0.44
SRPXP78539 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SRPXP78539 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRPXP78539 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.79■□□□□ 0.44
SRPXP78539 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SRPXP78539 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.78■□□□□ 0.44
SRPXP78539 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.78■□□□□ 0.44
SRPXP78539 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRPXP78539 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms