Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VBP1P61758 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VBP1P61758 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VBP1P61758 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
VBP1P61758 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.41■□□□□ 0.7
VBP1P61758 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VBP1P61758 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.41■□□□□ 0.7
VBP1P61758 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VBP1P61758 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.41■□□□□ 0.7
VBP1P61758 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VBP1P61758 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.41■□□□□ 0.7
VBP1P61758 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VBP1P61758 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
VBP1P61758 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.4■□□□□ 0.7
VBP1P61758 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
VBP1P61758 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VBP1P61758 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VBP1P61758 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VBP1P61758 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.39■□□□□ 0.7
VBP1P61758 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VBP1P61758 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
VBP1P61758 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VBP1P61758 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VBP1P61758 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VBP1P61758 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.39■□□□□ 0.69
VBP1P61758 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VBP1P61758 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VBP1P61758 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.39■□□□□ 0.69
VBP1P61758 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
VBP1P61758 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.38■□□□□ 0.69
VBP1P61758 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
VBP1P61758 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VBP1P61758 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VBP1P61758 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VBP1P61758 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VBP1P61758 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VBP1P61758 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VBP1P61758 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VBP1P61758 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
VBP1P61758 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VBP1P61758 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 FEM1AP1-201ENST00000431297 1995 ntBASIC19.37■□□□□ 0.69
VBP1P61758 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VBP1P61758 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VBP1P61758 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.37■□□□□ 0.69
VBP1P61758 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.37■□□□□ 0.69
VBP1P61758 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 RPS2P7-201ENST00000447334 885 ntBASIC19.37■□□□□ 0.69
VBP1P61758 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.37■□□□□ 0.69
VBP1P61758 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VBP1P61758 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
VBP1P61758 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VBP1P61758 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.37■□□□□ 0.69
VBP1P61758 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VBP1P61758 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VBP1P61758 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.36■□□□□ 0.69
VBP1P61758 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.36■□□□□ 0.69
VBP1P61758 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 ZNRF2P2-203ENST00000454624 420 ntBASIC19.36■□□□□ 0.69
VBP1P61758 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.36■□□□□ 0.69
VBP1P61758 LINC01960-201ENST00000563759 1884 ntBASIC19.36■□□□□ 0.69
VBP1P61758 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
VBP1P61758 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.36■□□□□ 0.69
VBP1P61758 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
VBP1P61758 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VBP1P61758 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.36■□□□□ 0.69
VBP1P61758 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VBP1P61758 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VBP1P61758 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VBP1P61758 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms