Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCR4P61073 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCR4P61073 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CXCR4P61073 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CXCR4P61073 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CXCR4P61073 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 FP325331.1-202ENST00000623531 1380 ntBASIC19.72■□□□□ 0.75
CXCR4P61073 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CXCR4P61073 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCR4P61073 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCR4P61073 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.72■□□□□ 0.75
CXCR4P61073 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCR4P61073 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.72■□□□□ 0.75
CXCR4P61073 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCR4P61073 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CXCR4P61073 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.71■□□□□ 0.75
CXCR4P61073 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCR4P61073 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCR4P61073 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.71■□□□□ 0.75
CXCR4P61073 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCR4P61073 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CXCR4P61073 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CXCR4P61073 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.71■□□□□ 0.75
CXCR4P61073 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.71■□□□□ 0.75
CXCR4P61073 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.71■□□□□ 0.75
CXCR4P61073 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CXCR4P61073 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCR4P61073 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCR4P61073 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CXCR4P61073 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCR4P61073 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
CXCR4P61073 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CXCR4P61073 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.69■□□□□ 0.74
CXCR4P61073 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.69■□□□□ 0.74
CXCR4P61073 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CXCR4P61073 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CXCR4P61073 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.68■□□□□ 0.74
CXCR4P61073 MIR4508-201ENST00000584178 70 ntBASIC19.68■□□□□ 0.74
CXCR4P61073 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CXCR4P61073 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CXCR4P61073 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms