Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 SPS2YDR522C 1509 nt3.52□□□□□ -1.85
YNL040WP53960 YLR345WYLR345W 1530 nt3.52□□□□□ -1.85
YNL040WP53960 MIT1YEL007W 2001 nt3.52□□□□□ -1.85
YNL040WP53960 YHL012WYHL012W 1482 nt3.52□□□□□ -1.85
YNL040WP53960 HEF3YNL014W 3135 nt3.52□□□□□ -1.85
YNL040WP53960 ROK1YGL171W 1695 nt3.52□□□□□ -1.85
YNL040WP53960 CIT1YNR001C 1440 nt3.52□□□□□ -1.85
YNL040WP53960 MDM38YOL027C 1722 nt3.51□□□□□ -1.85
YNL040WP53960 LSM6YDR378C 261 nt3.51□□□□□ -1.85
YNL040WP53960 YMR084WYMR084W 789 nt3.51□□□□□ -1.85
YNL040WP53960 OPY1YBR129C 987 nt3.51□□□□□ -1.85
YNL040WP53960 YBR255C-AYBR255C-A 363 nt3.51□□□□□ -1.85
YNL040WP53960 NUP60YAR002W 1620 nt3.51□□□□□ -1.85
YNL040WP53960 VTC4YJL012C 2166 nt3.51□□□□□ -1.85
YNL040WP53960 CHK1YBR274W 1584 nt3.51□□□□□ -1.85
YNL040WP53960 TYR1YBR166C 1359 nt3.51□□□□□ -1.85
YNL040WP53960 TAF8YML114C 1533 nt3.5□□□□□ -1.85
YNL040WP53960 MTH1YDR277C 1302 nt3.5□□□□□ -1.85
YNL040WP53960 GLO3YER122C 1482 nt3.5□□□□□ -1.85
YNL040WP53960 FKH2YNL068C 2589 nt3.5□□□□□ -1.85
YNL040WP53960 VAC17YCL063W 1272 nt3.5□□□□□ -1.85
YNL040WP53960 YCL075WYCL075W 441 nt3.5□□□□□ -1.85
YNL040WP53960 YOL050CYOL050C 321 nt3.5□□□□□ -1.85
YNL040WP53960 GLC3YEL011W 2115 nt3.5□□□□□ -1.85
YNL040WP53960 SHQ1YIL104C 1524 nt3.49□□□□□ -1.85
YNL040WP53960 CMK1YFR014C 1341 nt3.49□□□□□ -1.85
YNL040WP53960 RPA135YPR010C 3612 nt3.49□□□□□ -1.85
YNL040WP53960 CHA4YLR098C 1947 nt3.49□□□□□ -1.85
YNL040WP53960 YFL041W-AYFL041W-A 192 nt3.49□□□□□ -1.85
YNL040WP53960 ERG26YGL001C 1050 nt3.49□□□□□ -1.85
YNL040WP53960 RPL30YGL030W 318 nt3.49□□□□□ -1.85
YNL040WP53960 COS12YGL263W 1143 nt3.49□□□□□ -1.85
YNL040WP53960 BCD1YHR040W 1101 nt3.49□□□□□ -1.85
YNL040WP53960 YHR214C-EYHR214C-E 300 nt3.49□□□□□ -1.85
YNL040WP53960 YIL086CYIL086C 309 nt3.49□□□□□ -1.85
YNL040WP53960 PAM18YLR008C 507 nt3.49□□□□□ -1.85
YNL040WP53960 DCS1YLR270W 1053 nt3.49□□□□□ -1.85
YNL040WP53960 YAR070CYAR070C 300 nt3.49□□□□□ -1.85
YNL040WP53960 SPC24YMR117C 642 nt3.49□□□□□ -1.85
YNL040WP53960 SUI3YPL237W 858 nt3.49□□□□□ -1.85
YNL040WP53960 BUD6YLR319C 2367 nt3.49□□□□□ -1.85
YNL040WP53960 ALO1YML086C 1581 nt3.49□□□□□ -1.85
YNL040WP53960 RAD54YGL163C 2697 nt3.49□□□□□ -1.85
YNL040WP53960 YJR030CYJR030C 2238 nt3.48□□□□□ -1.85
YNL040WP53960 DHR2YKL078W 2208 nt3.48□□□□□ -1.85
YNL040WP53960 AGA1YNR044W 2178 nt3.48□□□□□ -1.85
YNL040WP53960 GCD1YOR260W 1737 nt3.48□□□□□ -1.85
YNL040WP53960 NUS1YDL193W 1128 nt3.48□□□□□ -1.85
YNL040WP53960 YDR090CYDR090C 933 nt3.48□□□□□ -1.85
YNL040WP53960 MIG3YER028C 1185 nt3.48□□□□□ -1.85
YNL040WP53960 ARD1YHR013C 717 nt3.48□□□□□ -1.85
YNL040WP53960 ERG20YJL167W 1059 nt3.48□□□□□ -1.85
YNL040WP53960 SPC3YLR066W 555 nt3.48□□□□□ -1.85
YNL040WP53960 GCD7YLR291C 1146 nt3.48□□□□□ -1.85
YNL040WP53960 CPR3YML078W 549 nt3.48□□□□□ -1.85
YNL040WP53960 TPM1YNL079C 600 nt3.48□□□□□ -1.85
YNL040WP53960 CNS1YBR155W 1158 nt3.48□□□□□ -1.85
YNL040WP53960 BUD5YCR038C 1929 nt3.47□□□□□ -1.85
YNL040WP53960 RRP17YDR412W 708 nt3.47□□□□□ -1.85
YNL040WP53960 IMP4YNL075W 873 nt3.47□□□□□ -1.85
YNL040WP53960 POC4YPL144W 447 nt3.47□□□□□ -1.85
YNL040WP53960 EMC1YCL045C 2283 nt3.47□□□□□ -1.85
YNL040WP53960 YRM1YOR172W 2361 nt3.47□□□□□ -1.85
YNL040WP53960 MSR1YHR091C 1932 nt3.46□□□□□ -1.85
YNL040WP53960 RAD4YER162C 2265 nt3.46□□□□□ -1.85
YNL040WP53960 EXO5YBR163W 1758 nt3.46□□□□□ -1.86
YNL040WP53960 STU2YLR045C 2667 nt3.46□□□□□ -1.86
YNL040WP53960 NOP6YDL213C 678 nt3.46□□□□□ -1.86
YNL040WP53960 YDR193WYDR193W 399 nt3.46□□□□□ -1.86
YNL040WP53960 FMC1YIL098C 468 nt3.46□□□□□ -1.86
YNL040WP53960 TTI2YJR136C 1266 nt3.46□□□□□ -1.86
YNL040WP53960 INN1YNL152W 1230 nt3.46□□□□□ -1.86
YNL040WP53960 SPB4YFL002C 1821 nt3.46□□□□□ -1.86
YNL040WP53960 SMP3YOR149C 1551 nt3.46□□□□□ -1.86
YNL040WP53960 CTR86YCR054C 1692 nt3.46□□□□□ -1.86
YNL040WP53960 SRO9YCL037C 1305 nt3.45□□□□□ -1.86
YNL040WP53960 SIZ1YDR409W 2715 nt3.45□□□□□ -1.86
YNL040WP53960 PUG1YER185W 912 nt3.45□□□□□ -1.86
YNL040WP53960 ILV5YLR355C 1188 nt3.45□□□□□ -1.86
YNL040WP53960 YNL320WYNL320W 855 nt3.45□□□□□ -1.86
YNL040WP53960 FDH2YPL275W 711 nt3.45□□□□□ -1.86
YNL040WP53960 RSM23YGL129C 1353 nt3.45□□□□□ -1.86
YNL040WP53960 TAF6YGL112C 1551 nt3.45□□□□□ -1.86
YNL040WP53960 YNR063WYNR063W 1824 nt3.44□□□□□ -1.86
YNL040WP53960 PMT6YGR199W 2280 nt3.44□□□□□ -1.86
YNL040WP53960 GEM1YAL048C 1989 nt3.44□□□□□ -1.86
YNL040WP53960 GAT2YMR136W 1683 nt3.44□□□□□ -1.86
YNL040WP53960 YCL068CYCL068C 783 nt3.44□□□□□ -1.86
YNL040WP53960 YCR101CYCR101C 549 nt3.44□□□□□ -1.86
YNL040WP53960 PSF1YDR013W 627 nt3.44□□□□□ -1.86
YNL040WP53960 YAL004WYAL004W 648 nt3.44□□□□□ -1.86
YNL040WP53960 YKL177WYKL177W 339 nt3.44□□□□□ -1.86
YNL040WP53960 SHE3YBR130C 1278 nt3.44□□□□□ -1.86
YNL040WP53960 ISW2YOR304W 3363 nt3.44□□□□□ -1.86
YNL040WP53960 PAF1YBR279W 1338 nt3.44□□□□□ -1.86
YNL040WP53960 YPK3YBR028C 1578 nt3.43□□□□□ -1.86
YNL040WP53960 NAT1YDL040C 2565 nt3.43□□□□□ -1.86
YNL040WP53960 ARG5,6YER069W 2592 nt3.43□□□□□ -1.86
YNL040WP53960 PUB1YNL016W 1362 nt3.43□□□□□ -1.86
YNL040WP53960 tC(GCA)BtC(GCA)B 72 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms