Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.78■□□□□ 0.92
CDK9P50750 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK9P50750 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.78■□□□□ 0.92
CDK9P50750 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDK9P50750 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK9P50750 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK9P50750 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CDK9P50750 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK9P50750 AC009086.3-201ENST00000623486 1008 ntBASIC20.77■□□□□ 0.92
CDK9P50750 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CDK9P50750 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK9P50750 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CDK9P50750 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
CDK9P50750 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK9P50750 AL512631.2-201ENST00000604634 923 ntBASIC20.76■□□□□ 0.91
CDK9P50750 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK9P50750 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK9P50750 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDK9P50750 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK9P50750 AC087742.1-201ENST00000575880 1738 ntBASIC20.75■□□□□ 0.91
CDK9P50750 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDK9P50750 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDK9P50750 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK9P50750 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK9P50750 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK9P50750 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK9P50750 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDK9P50750 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK9P50750 RNF165-205ENST00000588679 2904 ntBASIC20.74■□□□□ 0.91
CDK9P50750 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDK9P50750 AL136116.3-201ENST00000402907 1138 ntBASIC20.74■□□□□ 0.91
CDK9P50750 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDK9P50750 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 MIR4466-201ENST00000606121 54 ntBASIC20.74■□□□□ 0.91
CDK9P50750 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.74■□□□□ 0.91
CDK9P50750 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDK9P50750 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK9P50750 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDK9P50750 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK9P50750 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDK9P50750 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK9P50750 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK9P50750 AC004687.1-201ENST00000579003 1625 ntBASIC20.73■□□□□ 0.91
CDK9P50750 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK9P50750 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CDK9P50750 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDK9P50750 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK9P50750 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK9P50750 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK9P50750 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDK9P50750 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK9P50750 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CDK9P50750 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK9P50750 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK9P50750 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK9P50750 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK9P50750 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK9P50750 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK9P50750 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms