Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.82■■□□□ 1.08
CXCL12P48061 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CXCL12P48061 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCL12P48061 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CXCL12P48061 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCL12P48061 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCL12P48061 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CXCL12P48061 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.82■■□□□ 1.08
CXCL12P48061 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCL12P48061 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CXCL12P48061 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.81■■□□□ 1.08
CXCL12P48061 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
CXCL12P48061 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.81■■□□□ 1.08
CXCL12P48061 POU5F1P3-201ENST00000428824 1078 ntBASIC21.81■■□□□ 1.08
CXCL12P48061 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.81■■□□□ 1.08
CXCL12P48061 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CXCL12P48061 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCL12P48061 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CXCL12P48061 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
CXCL12P48061 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.8■■□□□ 1.08
CXCL12P48061 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 MIR4758-201ENST00000577688 71 ntBASIC21.8■■□□□ 1.08
CXCL12P48061 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CXCL12P48061 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.8■■□□□ 1.08
CXCL12P48061 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.8■■□□□ 1.08
CXCL12P48061 AC010536.3-201ENST00000620306 533 ntBASIC21.8■■□□□ 1.08
CXCL12P48061 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CXCL12P48061 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCL12P48061 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
CXCL12P48061 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCL12P48061 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCL12P48061 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CXCL12P48061 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.79■■□□□ 1.08
CXCL12P48061 KRT18P29-201ENST00000397031 1267 ntBASIC21.79■■□□□ 1.08
CXCL12P48061 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.79■■□□□ 1.08
CXCL12P48061 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CXCL12P48061 AC098934.4-201ENST00000564127 592 ntBASIC21.79■■□□□ 1.08
CXCL12P48061 ITM2C-210ENST00000620962 501 ntBASIC21.79■■□□□ 1.08
CXCL12P48061 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.79■■□□□ 1.08
CXCL12P48061 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CXCL12P48061 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCL12P48061 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CXCL12P48061 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.78■■□□□ 1.08
CXCL12P48061 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.78■■□□□ 1.08
CXCL12P48061 KRT18P20-201ENST00000548986 1279 ntBASIC21.78■■□□□ 1.08
CXCL12P48061 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.78■■□□□ 1.08
CXCL12P48061 DUSP8P3-201ENST00000399571 1760 ntBASIC21.78■■□□□ 1.08
CXCL12P48061 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.78■■□□□ 1.08
CXCL12P48061 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CXCL12P48061 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CXCL12P48061 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CXCL12P48061 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.77■■□□□ 1.08
CXCL12P48061 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CXCL12P48061 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CXCL12P48061 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CXCL12P48061 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CXCL12P48061 RNA5SP413-201ENST00000516373 109 ntBASIC21.76■■□□□ 1.07
CXCL12P48061 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.76■■□□□ 1.07
CXCL12P48061 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.75■■□□□ 1.07
CXCL12P48061 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.75■■□□□ 1.07
CXCL12P48061 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.75■■□□□ 1.07
CXCL12P48061 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CXCL12P48061 AC055733.4-201ENST00000638462 1354 ntBASIC21.74■■□□□ 1.07
CXCL12P48061 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CXCL12P48061 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CXCL12P48061 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CXCL12P48061 AC010141.2-201ENST00000452426 721 ntBASIC21.74■■□□□ 1.07
CXCL12P48061 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CXCL12P48061 AC138907.5-202ENST00000569484 235 ntBASIC21.74■■□□□ 1.07
CXCL12P48061 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.74■■□□□ 1.07
CXCL12P48061 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CXCL12P48061 AC013268.1-206ENST00000638368 961 ntBASIC21.74■■□□□ 1.07
CXCL12P48061 AC112229.1-201ENST00000639295 961 ntBASIC21.74■■□□□ 1.07
CXCL12P48061 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CXCL12P48061 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.74■■□□□ 1.07
CXCL12P48061 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CXCL12P48061 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.73■■□□□ 1.07
CXCL12P48061 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms