Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
HADHAP40939 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HADHAP40939 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HADHAP40939 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.91■■□□□ 1.1
HADHAP40939 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HADHAP40939 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.91■■□□□ 1.1
HADHAP40939 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HADHAP40939 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.91■■□□□ 1.1
HADHAP40939 AC068587.7-201ENST00000641602 218 ntBASIC21.91■■□□□ 1.1
HADHAP40939 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HADHAP40939 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.91■■□□□ 1.1
HADHAP40939 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HADHAP40939 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
HADHAP40939 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HADHAP40939 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HADHAP40939 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HADHAP40939 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HADHAP40939 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.9■■□□□ 1.1
HADHAP40939 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HADHAP40939 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.9■■□□□ 1.1
HADHAP40939 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HADHAP40939 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.9■■□□□ 1.1
HADHAP40939 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
HADHAP40939 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HADHAP40939 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.89■■□□□ 1.1
HADHAP40939 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HADHAP40939 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HADHAP40939 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
HADHAP40939 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HADHAP40939 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HADHAP40939 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HADHAP40939 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HADHAP40939 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 AL136162.1-201ENST00000607711 1078 ntBASIC21.89■■□□□ 1.09
HADHAP40939 AL031602.1-201ENST00000633169 911 ntBASIC21.89■■□□□ 1.09
HADHAP40939 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
HADHAP40939 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.89■■□□□ 1.09
HADHAP40939 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 AC135279.3-201ENST00000610945 1311 ntBASIC21.88■■□□□ 1.09
HADHAP40939 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.88■■□□□ 1.09
HADHAP40939 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.88■■□□□ 1.09
HADHAP40939 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.88■■□□□ 1.09
HADHAP40939 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HADHAP40939 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
HADHAP40939 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.87■■□□□ 1.09
HADHAP40939 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 AC096631.2-201ENST00000436136 790 ntBASIC21.87■■□□□ 1.09
HADHAP40939 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.87■■□□□ 1.09
HADHAP40939 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.87■■□□□ 1.09
HADHAP40939 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.87■■□□□ 1.09
HADHAP40939 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
HADHAP40939 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
HADHAP40939 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HADHAP40939 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HADHAP40939 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HADHAP40939 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.86■■□□□ 1.09
HADHAP40939 AC024257.2-201ENST00000549699 147 ntBASIC21.86■■□□□ 1.09
HADHAP40939 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
HADHAP40939 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HADHAP40939 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.86■■□□□ 1.09
HADHAP40939 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.86■■□□□ 1.09
HADHAP40939 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
HADHAP40939 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HADHAP40939 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HADHAP40939 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.85■■□□□ 1.09
HADHAP40939 MIR4767-201ENST00000582827 78 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms