Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PDE6BP35913 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PDE6BP35913 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PDE6BP35913 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PDE6BP35913 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PDE6BP35913 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27■■□□□ 1.91
PDE6BP35913 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27■■□□□ 1.91
PDE6BP35913 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27■■□□□ 1.91
PDE6BP35913 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDE6BP35913 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PDE6BP35913 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
PDE6BP35913 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PDE6BP35913 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27■■□□□ 1.91
PDE6BP35913 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PDE6BP35913 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PDE6BP35913 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
PDE6BP35913 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27■■□□□ 1.91
PDE6BP35913 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
PDE6BP35913 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27■■□□□ 1.91
PDE6BP35913 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PDE6BP35913 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.98■■□□□ 1.91
PDE6BP35913 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDE6BP35913 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDE6BP35913 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.98■■□□□ 1.91
PDE6BP35913 KRT18P20-201ENST00000548986 1279 ntBASIC26.98■■□□□ 1.91
PDE6BP35913 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.98■■□□□ 1.91
PDE6BP35913 AC010536.3-201ENST00000620306 533 ntBASIC26.98■■□□□ 1.91
PDE6BP35913 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE6BP35913 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PDE6BP35913 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDE6BP35913 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PDE6BP35913 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE6BP35913 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.97■■□□□ 1.91
PDE6BP35913 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PDE6BP35913 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.97■■□□□ 1.91
PDE6BP35913 AC098934.4-201ENST00000564127 592 ntBASIC26.97■■□□□ 1.91
PDE6BP35913 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.97■■□□□ 1.91
PDE6BP35913 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
PDE6BP35913 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PDE6BP35913 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.97■■□□□ 1.91
PDE6BP35913 AC055733.4-201ENST00000638462 1354 ntBASIC26.97■■□□□ 1.91
PDE6BP35913 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PDE6BP35913 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PDE6BP35913 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
PDE6BP35913 AC093827.2-201ENST00000512654 315 ntBASIC26.96■■□□□ 1.91
PDE6BP35913 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.96■■□□□ 1.91
PDE6BP35913 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.96■■□□□ 1.91
PDE6BP35913 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
PDE6BP35913 AC008687.6-201ENST00000596318 630 ntBASIC26.96■■□□□ 1.91
PDE6BP35913 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
PDE6BP35913 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PDE6BP35913 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PDE6BP35913 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.95■■□□□ 1.91
PDE6BP35913 LINC00543-201ENST00000567234 1845 ntBASIC26.95■■□□□ 1.91
PDE6BP35913 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
PDE6BP35913 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.95■■□□□ 1.9
PDE6BP35913 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.95■■□□□ 1.9
PDE6BP35913 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PDE6BP35913 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.94■■□□□ 1.9
PDE6BP35913 POU5F1P3-201ENST00000428824 1078 ntBASIC26.94■■□□□ 1.9
PDE6BP35913 AC010141.2-201ENST00000452426 721 ntBASIC26.94■■□□□ 1.9
PDE6BP35913 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PDE6BP35913 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.94■■□□□ 1.9
PDE6BP35913 MIR4758-201ENST00000577688 71 ntBASIC26.94■■□□□ 1.9
PDE6BP35913 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.94■■□□□ 1.9
PDE6BP35913 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PDE6BP35913 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PDE6BP35913 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.93■■□□□ 1.9
PDE6BP35913 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PDE6BP35913 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.93■■□□□ 1.9
PDE6BP35913 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.93■■□□□ 1.9
PDE6BP35913 AC138907.5-202ENST00000569484 235 ntBASIC26.93■■□□□ 1.9
PDE6BP35913 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PDE6BP35913 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PDE6BP35913 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDE6BP35913 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.92■■□□□ 1.9
PDE6BP35913 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDE6BP35913 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.92■■□□□ 1.9
PDE6BP35913 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.92■■□□□ 1.9
PDE6BP35913 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.92■■□□□ 1.9
PDE6BP35913 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PDE6BP35913 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.92■■□□□ 1.9
PDE6BP35913 ITM2C-210ENST00000620962 501 ntBASIC26.92■■□□□ 1.9
PDE6BP35913 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PDE6BP35913 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
PDE6BP35913 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.92■■□□□ 1.9
PDE6BP35913 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.92■■□□□ 1.9
PDE6BP35913 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms