Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.68■□□□□ 0.74
GDF1P27539 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
GDF1P27539 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GDF1P27539 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 AC079089.2-201ENST00000531211 1277 ntBASIC19.67■□□□□ 0.74
GDF1P27539 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.67■□□□□ 0.74
GDF1P27539 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDF1P27539 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
GDF1P27539 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.66■□□□□ 0.74
GDF1P27539 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GDF1P27539 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.66■□□□□ 0.74
GDF1P27539 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 TPRG1LP1-201ENST00000598702 760 ntBASIC19.66■□□□□ 0.74
GDF1P27539 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.66■□□□□ 0.74
GDF1P27539 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GDF1P27539 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDF1P27539 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.66■□□□□ 0.74
GDF1P27539 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
GDF1P27539 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GDF1P27539 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
GDF1P27539 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.65■□□□□ 0.74
GDF1P27539 KRT18P5-201ENST00000436075 1291 ntBASIC19.65■□□□□ 0.74
GDF1P27539 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.65■□□□□ 0.74
GDF1P27539 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GDF1P27539 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.65■□□□□ 0.74
GDF1P27539 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GDF1P27539 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDF1P27539 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GDF1P27539 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.64■□□□□ 0.73
GDF1P27539 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GDF1P27539 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GDF1P27539 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GDF1P27539 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.64■□□□□ 0.73
GDF1P27539 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
GDF1P27539 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GDF1P27539 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
GDF1P27539 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GDF1P27539 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.63■□□□□ 0.73
GDF1P27539 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
GDF1P27539 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GDF1P27539 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.62■□□□□ 0.73
GDF1P27539 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
GDF1P27539 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GDF1P27539 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
GDF1P27539 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
GDF1P27539 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GDF1P27539 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GDF1P27539 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
GDF1P27539 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.61■□□□□ 0.73
GDF1P27539 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GDF1P27539 OR7E47P-201ENST00000546390 1422 ntBASIC19.61■□□□□ 0.73
GDF1P27539 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.61■□□□□ 0.73
GDF1P27539 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GDF1P27539 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.61■□□□□ 0.73
GDF1P27539 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.61■□□□□ 0.73
GDF1P27539 NTF6G-201ENST00000591094 616 ntBASIC19.61■□□□□ 0.73
GDF1P27539 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms