Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LBPP18428 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LBPP18428 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LBPP18428 AC010997.5-201ENST00000609182 354 ntBASIC20.91■□□□□ 0.94
LBPP18428 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LBPP18428 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
LBPP18428 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LBPP18428 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.9■□□□□ 0.94
LBPP18428 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LBPP18428 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LBPP18428 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LBPP18428 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.89■□□□□ 0.94
LBPP18428 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LBPP18428 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
LBPP18428 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
LBPP18428 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LBPP18428 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBPP18428 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBPP18428 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LBPP18428 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LBPP18428 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
LBPP18428 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LBPP18428 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LBPP18428 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LBPP18428 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBPP18428 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LBPP18428 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.87■□□□□ 0.93
LBPP18428 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LBPP18428 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBPP18428 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBPP18428 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.87■□□□□ 0.93
LBPP18428 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LBPP18428 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
LBPP18428 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.86■□□□□ 0.93
LBPP18428 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.86■□□□□ 0.93
LBPP18428 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 AC005229.4-201ENST00000610085 2198 ntBASIC20.86■□□□□ 0.93
LBPP18428 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.86■□□□□ 0.93
LBPP18428 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.86■□□□□ 0.93
LBPP18428 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
LBPP18428 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.86■□□□□ 0.93
LBPP18428 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.86■□□□□ 0.93
LBPP18428 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
LBPP18428 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
LBPP18428 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBPP18428 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
LBPP18428 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.85■□□□□ 0.93
LBPP18428 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.85■□□□□ 0.93
LBPP18428 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
LBPP18428 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
LBPP18428 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.85■□□□□ 0.93
LBPP18428 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
LBPP18428 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBPP18428 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBPP18428 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
LBPP18428 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBPP18428 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.84■□□□□ 0.93
LBPP18428 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LBPP18428 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBPP18428 TSPY9P-201ENST00000440215 945 ntBASIC20.84■□□□□ 0.93
LBPP18428 TSPY11P-201ENST00000442607 1045 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms