Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.13■□□□□ 0.65
ERCC1P07992 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ERCC1P07992 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
ERCC1P07992 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ERCC1P07992 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
ERCC1P07992 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
ERCC1P07992 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ERCC1P07992 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC1P07992 AC091305.1-201ENST00000479476 895 ntBASIC19.12■□□□□ 0.65
ERCC1P07992 AC027682.1-201ENST00000562846 899 ntBASIC19.12■□□□□ 0.65
ERCC1P07992 MIR4767-201ENST00000582827 78 ntBASIC19.12■□□□□ 0.65
ERCC1P07992 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC1P07992 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.12■□□□□ 0.65
ERCC1P07992 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC1P07992 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC1P07992 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC1P07992 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ERCC1P07992 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
ERCC1P07992 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC1P07992 C11orf96-202ENST00000528572 1834 ntBASIC19.11■□□□□ 0.65
ERCC1P07992 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC1P07992 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC1P07992 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC1P07992 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC1P07992 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC1P07992 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC1P07992 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC1P07992 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC1P07992 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC1P07992 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC1P07992 AF213884.3-201ENST00000563833 479 ntBASIC19.1■□□□□ 0.65
ERCC1P07992 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC1P07992 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ERCC1P07992 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC1P07992 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC1P07992 AC139530.1-201ENST00000575312 1977 ntBASIC19.1■□□□□ 0.65
ERCC1P07992 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC1P07992 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.09■□□□□ 0.65
ERCC1P07992 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC1P07992 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC1P07992 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.09■□□□□ 0.65
ERCC1P07992 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC1P07992 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC1P07992 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC1P07992 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 SUDS3P1-201ENST00000505831 966 ntBASIC19.09■□□□□ 0.65
ERCC1P07992 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC1P07992 AC136469.2-201ENST00000623944 1028 ntBASIC19.09■□□□□ 0.65
ERCC1P07992 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC1P07992 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC1P07992 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC1P07992 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC1P07992 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ERCC1P07992 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 LINC01529-204ENST00000636474 1715 ntBASIC19.08■□□□□ 0.65
ERCC1P07992 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC1P07992 FP325331.1-202ENST00000623531 1380 ntBASIC19.08■□□□□ 0.65
ERCC1P07992 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ERCC1P07992 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC1P07992 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC1P07992 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC1P07992 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC1P07992 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC1P07992 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC1P07992 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC1P07992 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC1P07992 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC1P07992 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC1P07992 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms