Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.15■■□□□ 1.3
RB1P06400 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RB1P06400 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RB1P06400 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.15■■□□□ 1.3
RB1P06400 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RB1P06400 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RB1P06400 DUSP8P3-201ENST00000399571 1760 ntBASIC23.14■■□□□ 1.3
RB1P06400 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RB1P06400 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RB1P06400 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.14■■□□□ 1.29
RB1P06400 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.14■■□□□ 1.29
RB1P06400 AC105036.2-201ENST00000569468 176 ntBASIC23.14■■□□□ 1.29
RB1P06400 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.14■■□□□ 1.29
RB1P06400 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RB1P06400 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.14■■□□□ 1.29
RB1P06400 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RB1P06400 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.13■■□□□ 1.29
RB1P06400 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.13■■□□□ 1.29
RB1P06400 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.13■■□□□ 1.29
RB1P06400 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.13■■□□□ 1.29
RB1P06400 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RB1P06400 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RB1P06400 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RB1P06400 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.12■■□□□ 1.29
RB1P06400 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RB1P06400 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RB1P06400 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RB1P06400 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.12■■□□□ 1.29
RB1P06400 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
RB1P06400 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.12■■□□□ 1.29
RB1P06400 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
RB1P06400 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RB1P06400 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.11■■□□□ 1.29
RB1P06400 AC010536.3-201ENST00000620306 533 ntBASIC23.11■■□□□ 1.29
RB1P06400 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.11■■□□□ 1.29
RB1P06400 AC055733.4-201ENST00000638462 1354 ntBASIC23.11■■□□□ 1.29
RB1P06400 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RB1P06400 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.1■■□□□ 1.29
RB1P06400 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
RB1P06400 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RB1P06400 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.1■■□□□ 1.29
RB1P06400 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RB1P06400 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.1■■□□□ 1.29
RB1P06400 AC138907.5-202ENST00000569484 235 ntBASIC23.1■■□□□ 1.29
RB1P06400 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.1■■□□□ 1.29
RB1P06400 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.1■■□□□ 1.29
RB1P06400 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RB1P06400 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.1■■□□□ 1.29
RB1P06400 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RB1P06400 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RB1P06400 LINC00543-201ENST00000567234 1845 ntBASIC23.1■■□□□ 1.29
RB1P06400 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RB1P06400 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RB1P06400 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RB1P06400 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RB1P06400 AC010141.2-201ENST00000452426 721 ntBASIC23.09■■□□□ 1.29
RB1P06400 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RB1P06400 MIR4758-201ENST00000577688 71 ntBASIC23.09■■□□□ 1.29
RB1P06400 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RB1P06400 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RB1P06400 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RB1P06400 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RB1P06400 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RB1P06400 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RB1P06400 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.08■■□□□ 1.29
RB1P06400 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.08■■□□□ 1.29
RB1P06400 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RB1P06400 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RB1P06400 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.08■■□□□ 1.29
RB1P06400 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.08■■□□□ 1.29
RB1P06400 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RB1P06400 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RB1P06400 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RB1P06400 AL139125.2-201ENST00000623134 1869 ntBASIC23.07■■□□□ 1.28
RB1P06400 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.07■■□□□ 1.28
RB1P06400 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.07■■□□□ 1.28
RB1P06400 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.07■■□□□ 1.28
RB1P06400 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.07■■□□□ 1.28
RB1P06400 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.07■■□□□ 1.28
RB1P06400 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RB1P06400 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.07■■□□□ 1.28
RB1P06400 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RB1P06400 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RB1P06400 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RB1P06400 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RB1P06400 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms