Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
HMGN1P05114 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGN1P05114 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGN1P05114 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGN1P05114 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGN1P05114 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGN1P05114 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGN1P05114 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGN1P05114 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGN1P05114 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HMGN1P05114 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGN1P05114 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGN1P05114 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGN1P05114 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 C17orf82-201ENST00000623772 1530 ntBASIC19.57■□□□□ 0.72
HMGN1P05114 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGN1P05114 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGN1P05114 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGN1P05114 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.57■□□□□ 0.72
HMGN1P05114 KRT125P-201ENST00000546827 989 ntBASIC19.57■□□□□ 0.72
HMGN1P05114 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 MTDHP2-201ENST00000601468 714 ntBASIC19.57■□□□□ 0.72
HMGN1P05114 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGN1P05114 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HMGN1P05114 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMGN1P05114 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGN1P05114 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.57■□□□□ 0.72
HMGN1P05114 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGN1P05114 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HMGN1P05114 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGN1P05114 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.56■□□□□ 0.72
HMGN1P05114 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.56■□□□□ 0.72
HMGN1P05114 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HMGN1P05114 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGN1P05114 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HMGN1P05114 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMGN1P05114 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HMGN1P05114 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMGN1P05114 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGN1P05114 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HMGN1P05114 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGN1P05114 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGN1P05114 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HMGN1P05114 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.55■□□□□ 0.72
HMGN1P05114 Z92544.1-202ENST00000571933 1220 ntBASIC19.55■□□□□ 0.72
HMGN1P05114 AL499627.2-201ENST00000606283 725 ntBASIC19.55■□□□□ 0.72
HMGN1P05114 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGN1P05114 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HMGN1P05114 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGN1P05114 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMGN1P05114 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HMGN1P05114 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGN1P05114 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGN1P05114 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
HMGN1P05114 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HMGN1P05114 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGN1P05114 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGN1P05114 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGN1P05114 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGN1P05114 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms