Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TCRAP04437 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRAP04437 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRAP04437 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRAP04437 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.47■□□□□ 0.23
TCRAP04437 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRAP04437 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TCRAP04437 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRAP04437 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRAP04437 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRAP04437 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRAP04437 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRAP04437 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 AC004687.1-201ENST00000579003 1625 ntBASIC16.46■□□□□ 0.23
TCRAP04437 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRAP04437 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRAP04437 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TCRAP04437 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TCRAP04437 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRAP04437 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TCRAP04437 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.46■□□□□ 0.22
TCRAP04437 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRAP04437 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.45■□□□□ 0.22
TCRAP04437 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRAP04437 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TCRAP04437 AC010980.1-201ENST00000587192 1142 ntBASIC16.45■□□□□ 0.22
TCRAP04437 HSD17B1P1-201ENST00000590052 955 ntBASIC16.45■□□□□ 0.22
TCRAP04437 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.45■□□□□ 0.22
TCRAP04437 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRAP04437 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRAP04437 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TCRAP04437 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.44■□□□□ 0.22
TCRAP04437 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TCRAP04437 NTF6A-201ENST00000591175 560 ntBASIC16.44■□□□□ 0.22
TCRAP04437 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.44■□□□□ 0.22
TCRAP04437 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TCRAP04437 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 FEM1AP4-201ENST00000443167 1987 ntBASIC16.44■□□□□ 0.22
TCRAP04437 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
TCRAP04437 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRAP04437 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRAP04437 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRAP04437 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TCRAP04437 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 MIR6722-201ENST00000617286 78 ntBASIC16.43■□□□□ 0.22
TCRAP04437 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TCRAP04437 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRAP04437 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
TCRAP04437 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.43■□□□□ 0.22
TCRAP04437 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TCRAP04437 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.42■□□□□ 0.22
TCRAP04437 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRAP04437 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TCRAP04437 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.42■□□□□ 0.22
TCRAP04437 ATP5G2P3-201ENST00000429083 425 ntBASIC16.42■□□□□ 0.22
TCRAP04437 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.42■□□□□ 0.22
TCRAP04437 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TCRAP04437 ABHD17AP5-201ENST00000580133 923 ntBASIC16.42■□□□□ 0.22
TCRAP04437 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms