Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ABHD17AP1-201ENST00000358206 933 ntBASIC20.22■□□□□ 0.83
PDGFAP04085 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.22■□□□□ 0.83
PDGFAP04085 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.22■□□□□ 0.83
PDGFAP04085 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFAP04085 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.22■□□□□ 0.83
PDGFAP04085 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDGFAP04085 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFAP04085 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 AL355802.2-201ENST00000402069 882 ntBASIC20.21■□□□□ 0.83
PDGFAP04085 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PDGFAP04085 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.21■□□□□ 0.83
PDGFAP04085 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.21■□□□□ 0.83
PDGFAP04085 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 BX005040.4-201ENST00000637145 1518 ntBASIC20.21■□□□□ 0.83
PDGFAP04085 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDGFAP04085 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 AL139125.2-201ENST00000623134 1869 ntBASIC20.2■□□□□ 0.82
PDGFAP04085 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.2■□□□□ 0.82
PDGFAP04085 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFAP04085 AC006970.2-201ENST00000450065 779 ntBASIC20.2■□□□□ 0.82
PDGFAP04085 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.2■□□□□ 0.82
PDGFAP04085 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.2■□□□□ 0.82
PDGFAP04085 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.2■□□□□ 0.82
PDGFAP04085 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDGFAP04085 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFAP04085 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFAP04085 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFAP04085 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDGFAP04085 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDGFAP04085 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.19■□□□□ 0.82
PDGFAP04085 AL109923.1-201ENST00000618799 583 ntBASIC20.19■□□□□ 0.82
PDGFAP04085 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDGFAP04085 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDGFAP04085 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.18■□□□□ 0.82
PDGFAP04085 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFAP04085 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.18■□□□□ 0.82
PDGFAP04085 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDGFAP04085 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
PDGFAP04085 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 AC004687.1-201ENST00000579003 1625 ntBASIC20.17■□□□□ 0.82
PDGFAP04085 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFAP04085 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.17■□□□□ 0.82
PDGFAP04085 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 AC138932.3-201ENST00000567634 1902 ntBASIC20.17■□□□□ 0.82
PDGFAP04085 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDGFAP04085 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.17■□□□□ 0.82
PDGFAP04085 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFAP04085 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PDGFAP04085 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 NCF1B-203ENST00000435988 1254 ntBASIC20.16■□□□□ 0.82
PDGFAP04085 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFAP04085 SMUG1P1-201ENST00000590640 811 ntBASIC20.16■□□□□ 0.82
PDGFAP04085 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.16■□□□□ 0.82
PDGFAP04085 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDGFAP04085 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDGFAP04085 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFAP04085 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.16■□□□□ 0.82
PDGFAP04085 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDGFAP04085 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFAP04085 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDGFAP04085 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFAP04085 KRT19P1-201ENST00000405746 1186 ntBASIC20.15■□□□□ 0.82
PDGFAP04085 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDGFAP04085 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFAP04085 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFAP04085 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.15■□□□□ 0.82
PDGFAP04085 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.15■□□□□ 0.82
PDGFAP04085 AC011767.1-201ENST00000617410 1153 ntBASIC20.15■□□□□ 0.82
PDGFAP04085 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFAP04085 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms