Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FP325331.1-202ENST00000623531 1380 ntBASIC22■■□□□ 1.11
MT-ND3P03897 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22■■□□□ 1.11
MT-ND3P03897 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MT-ND3P03897 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 FAM99A-202ENST00000538190 1989 ntBASIC21.99■■□□□ 1.11
MT-ND3P03897 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.99■■□□□ 1.11
MT-ND3P03897 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
MT-ND3P03897 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.99■■□□□ 1.11
MT-ND3P03897 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 AL512631.2-201ENST00000604634 923 ntBASIC21.99■■□□□ 1.11
MT-ND3P03897 MIR4466-201ENST00000606121 54 ntBASIC21.99■■□□□ 1.11
MT-ND3P03897 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.99■■□□□ 1.11
MT-ND3P03897 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MT-ND3P03897 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 LINC01960-201ENST00000563759 1884 ntBASIC21.98■■□□□ 1.11
MT-ND3P03897 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
MT-ND3P03897 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.98■■□□□ 1.11
MT-ND3P03897 AC010542.4-201ENST00000563151 1910 ntBASIC21.98■■□□□ 1.11
MT-ND3P03897 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
MT-ND3P03897 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MT-ND3P03897 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.97■■□□□ 1.11
MT-ND3P03897 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.97■■□□□ 1.11
MT-ND3P03897 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.97■■□□□ 1.11
MT-ND3P03897 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MT-ND3P03897 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
MT-ND3P03897 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.96■■□□□ 1.11
MT-ND3P03897 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
MT-ND3P03897 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.96■■□□□ 1.11
MT-ND3P03897 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
MT-ND3P03897 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
MT-ND3P03897 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.96■■□□□ 1.11
MT-ND3P03897 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.96■■□□□ 1.11
MT-ND3P03897 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
MT-ND3P03897 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
MT-ND3P03897 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MT-ND3P03897 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.96■■□□□ 1.11
MT-ND3P03897 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
MT-ND3P03897 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
MT-ND3P03897 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.95■■□□□ 1.1
MT-ND3P03897 AC096631.2-201ENST00000436136 790 ntBASIC21.95■■□□□ 1.1
MT-ND3P03897 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.95■■□□□ 1.1
MT-ND3P03897 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
MT-ND3P03897 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MT-ND3P03897 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.95■■□□□ 1.1
MT-ND3P03897 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
MT-ND3P03897 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MT-ND3P03897 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.94■■□□□ 1.1
MT-ND3P03897 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MT-ND3P03897 AC110285.6-201ENST00000617652 491 ntBASIC21.94■■□□□ 1.1
MT-ND3P03897 AC009086.3-201ENST00000623486 1008 ntBASIC21.94■■□□□ 1.1
MT-ND3P03897 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MT-ND3P03897 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
MT-ND3P03897 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.94■■□□□ 1.1
MT-ND3P03897 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
MT-ND3P03897 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
MT-ND3P03897 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MT-ND3P03897 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
MT-ND3P03897 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.94■■□□□ 1.1
MT-ND3P03897 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms