Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 AC242852.2-201ENST00000615738 1807 ntBASIC22.07■■□□□ 1.12
PRAMEF11O60813 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.07■■□□□ 1.12
PRAMEF11O60813 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PRAMEF11O60813 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 AC012414.1-201ENST00000556676 535 ntBASIC22.06■■□□□ 1.12
PRAMEF11O60813 AL358852.1-201ENST00000623174 1268 ntBASIC22.06■■□□□ 1.12
PRAMEF11O60813 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PRAMEF11O60813 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRAMEF11O60813 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PRAMEF11O60813 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 AL354811.1-201ENST00000610286 706 ntBASIC22.05■■□□□ 1.12
PRAMEF11O60813 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.05■■□□□ 1.12
PRAMEF11O60813 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PRAMEF11O60813 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRAMEF11O60813 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.04■■□□□ 1.12
PRAMEF11O60813 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.04■■□□□ 1.12
PRAMEF11O60813 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PRAMEF11O60813 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.04■■□□□ 1.12
PRAMEF11O60813 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PRAMEF11O60813 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.04■■□□□ 1.12
PRAMEF11O60813 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRAMEF11O60813 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.03■■□□□ 1.12
PRAMEF11O60813 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 AL117328.2-201ENST00000624617 1940 ntBASIC22.02■■□□□ 1.12
PRAMEF11O60813 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRAMEF11O60813 ECEL1P1-201ENST00000373592 1742 ntBASIC22.02■■□□□ 1.12
PRAMEF11O60813 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.02■■□□□ 1.12
PRAMEF11O60813 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PRAMEF11O60813 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRAMEF11O60813 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.01■■□□□ 1.11
PRAMEF11O60813 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRAMEF11O60813 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms