Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF4O60810 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRAMEF4O60810 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.95■□□□□ 0.94
PRAMEF4O60810 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF4O60810 AC079089.2-201ENST00000531211 1277 ntBASIC20.95■□□□□ 0.94
PRAMEF4O60810 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF4O60810 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF4O60810 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF4O60810 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF4O60810 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEF4O60810 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRAMEF4O60810 AC096631.2-201ENST00000436136 790 ntBASIC20.94■□□□□ 0.94
PRAMEF4O60810 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF4O60810 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF4O60810 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF4O60810 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF4O60810 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PRAMEF4O60810 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRAMEF4O60810 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF4O60810 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF4O60810 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF4O60810 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PRAMEF4O60810 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.92■□□□□ 0.94
PRAMEF4O60810 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
PRAMEF4O60810 AC068587.7-201ENST00000641602 218 ntBASIC20.92■□□□□ 0.94
PRAMEF4O60810 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF4O60810 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 AC010141.3-201ENST00000456659 717 ntBASIC20.91■□□□□ 0.94
PRAMEF4O60810 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 AC135279.3-201ENST00000610945 1311 ntBASIC20.91■□□□□ 0.94
PRAMEF4O60810 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEF4O60810 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEF4O60810 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PRAMEF4O60810 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF4O60810 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PRAMEF4O60810 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.9■□□□□ 0.94
PRAMEF4O60810 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEF4O60810 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.9■□□□□ 0.94
PRAMEF4O60810 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEF4O60810 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.89■□□□□ 0.94
PRAMEF4O60810 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF4O60810 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEF4O60810 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.89■□□□□ 0.94
PRAMEF4O60810 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PRAMEF4O60810 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF4O60810 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.89■□□□□ 0.93
PRAMEF4O60810 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF4O60810 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEF4O60810 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF4O60810 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEF4O60810 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 BX842568.3-201ENST00000418104 571 ntBASIC20.88■□□□□ 0.93
PRAMEF4O60810 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 AP005435.1-201ENST00000529293 1178 ntBASIC20.88■□□□□ 0.93
PRAMEF4O60810 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 OXCT2P1-201ENST00000447263 1535 ntBASIC20.88■□□□□ 0.93
PRAMEF4O60810 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRAMEF4O60810 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF4O60810 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF4O60810 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF4O60810 PBX2P1-201ENST00000493219 1291 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms