Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA12O60330 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHGA12O60330 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA12O60330 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHGA12O60330 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA12O60330 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA12O60330 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHGA12O60330 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 KRT18P11-201ENST00000435214 1283 ntBASIC21.48■■□□□ 1.03
PCDHGA12O60330 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 AC104771.1-201ENST00000603335 964 ntBASIC21.48■■□□□ 1.03
PCDHGA12O60330 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA12O60330 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA12O60330 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGA12O60330 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA12O60330 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHGA12O60330 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGA12O60330 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGA12O60330 AC087239.1-201ENST00000622671 572 ntBASIC21.47■■□□□ 1.03
PCDHGA12O60330 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA12O60330 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 ABCB10P4-201ENST00000566803 2184 ntBASIC21.46■■□□□ 1.03
PCDHGA12O60330 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.46■■□□□ 1.03
PCDHGA12O60330 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 AC006970.2-201ENST00000450065 779 ntBASIC21.46■■□□□ 1.03
PCDHGA12O60330 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA12O60330 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA12O60330 C9orf163-202ENST00000624034 2573 ntBASIC21.45■■□□□ 1.03
PCDHGA12O60330 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHGA12O60330 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA12O60330 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA12O60330 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGA12O60330 SMUG1P1-201ENST00000590640 811 ntBASIC21.45■■□□□ 1.02
PCDHGA12O60330 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA12O60330 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGA12O60330 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA12O60330 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA12O60330 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA12O60330 CROCCP5-201ENST00000436658 830 ntBASIC21.44■■□□□ 1.02
PCDHGA12O60330 AC010141.3-201ENST00000456659 717 ntBASIC21.44■■□□□ 1.02
PCDHGA12O60330 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms