Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA4O00483 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NDUFA4O00483 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA4O00483 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA4O00483 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA4O00483 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA4O00483 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA4O00483 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA4O00483 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA4O00483 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
NDUFA4O00483 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NDUFA4O00483 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFA4O00483 OR7E47P-201ENST00000546390 1422 ntBASIC16.64■□□□□ 0.25
NDUFA4O00483 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NDUFA4O00483 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.64■□□□□ 0.25
NDUFA4O00483 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFA4O00483 AC110285.6-201ENST00000617652 491 ntBASIC16.64■□□□□ 0.25
NDUFA4O00483 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
NDUFA4O00483 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDUFA4O00483 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.64■□□□□ 0.25
NDUFA4O00483 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA4O00483 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NDUFA4O00483 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NDUFA4O00483 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA4O00483 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.63■□□□□ 0.25
NDUFA4O00483 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.63■□□□□ 0.25
NDUFA4O00483 AC027682.1-201ENST00000562846 899 ntBASIC16.63■□□□□ 0.25
NDUFA4O00483 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NDUFA4O00483 AC126544.1-201ENST00000580842 1059 ntBASIC16.63■□□□□ 0.25
NDUFA4O00483 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.63■□□□□ 0.25
NDUFA4O00483 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA4O00483 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA4O00483 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.63■□□□□ 0.25
NDUFA4O00483 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA4O00483 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA4O00483 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFA4O00483 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.62■□□□□ 0.25
NDUFA4O00483 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFA4O00483 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NDUFA4O00483 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NDUFA4O00483 AL355001.2-201ENST00000620617 1191 ntBASIC16.62■□□□□ 0.25
NDUFA4O00483 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFA4O00483 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.62■□□□□ 0.25
NDUFA4O00483 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA4O00483 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 C11orf96-202ENST00000528572 1834 ntBASIC16.61■□□□□ 0.25
NDUFA4O00483 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NDUFA4O00483 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA4O00483 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NDUFA4O00483 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA4O00483 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA4O00483 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
NDUFA4O00483 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA4O00483 AC133561.4-201ENST00000566112 224 ntBASIC16.61■□□□□ 0.25
NDUFA4O00483 AC008764.7-201ENST00000593779 1081 ntBASIC16.61■□□□□ 0.25
NDUFA4O00483 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA4O00483 AL139246.5-201ENST00000606645 996 ntBASIC16.61■□□□□ 0.25
NDUFA4O00483 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA4O00483 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 PKD1P6-201ENST00000343738 4769 ntBASIC16.61■□□□□ 0.25
NDUFA4O00483 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA4O00483 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.6■□□□□ 0.25
NDUFA4O00483 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA4O00483 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms