Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
TAF4O00268 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
TAF4O00268 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 AC083906.2-201ENST00000511578 360 ntBASIC21.1■□□□□ 0.97
TAF4O00268 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.1■□□□□ 0.97
TAF4O00268 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TAF4O00268 AL121832.2-201ENST00000610979 668 ntBASIC21.1■□□□□ 0.97
TAF4O00268 AL050303.2-201ENST00000619798 666 ntBASIC21.1■□□□□ 0.97
TAF4O00268 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
TAF4O00268 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.1■□□□□ 0.97
TAF4O00268 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
TAF4O00268 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TAF4O00268 AC133637.1-201ENST00000624115 1537 ntBASIC21.09■□□□□ 0.97
TAF4O00268 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TAF4O00268 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TAF4O00268 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.09■□□□□ 0.97
TAF4O00268 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TAF4O00268 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 AC069152.1-201ENST00000438030 544 ntBASIC21.09■□□□□ 0.97
TAF4O00268 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.09■□□□□ 0.97
TAF4O00268 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.09■□□□□ 0.97
TAF4O00268 AL138781.1-201ENST00000566567 1274 ntBASIC21.09■□□□□ 0.97
TAF4O00268 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.09■□□□□ 0.97
TAF4O00268 TPRG1LP1-201ENST00000598702 760 ntBASIC21.09■□□□□ 0.97
TAF4O00268 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.09■□□□□ 0.97
TAF4O00268 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.09■□□□□ 0.97
TAF4O00268 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
TAF4O00268 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TAF4O00268 AL022069.1-201ENST00000568025 1636 ntBASIC21.08■□□□□ 0.97
TAF4O00268 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.08■□□□□ 0.97
TAF4O00268 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TAF4O00268 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
TAF4O00268 GUSBP6-202ENST00000438529 1198 ntBASIC21.08■□□□□ 0.97
TAF4O00268 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.08■□□□□ 0.97
TAF4O00268 DUX4L4-201ENST00000566884 1269 ntBASIC21.08■□□□□ 0.97
TAF4O00268 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.08■□□□□ 0.97
TAF4O00268 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TAF4O00268 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.08■□□□□ 0.97
TAF4O00268 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TAF4O00268 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
TAF4O00268 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
TAF4O00268 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.08■□□□□ 0.96
TAF4O00268 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TAF4O00268 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TAF4O00268 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TAF4O00268 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.07■□□□□ 0.96
TAF4O00268 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.07■□□□□ 0.96
TAF4O00268 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.07■□□□□ 0.96
TAF4O00268 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TAF4O00268 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.07■□□□□ 0.96
TAF4O00268 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TAF4O00268 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TAF4O00268 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.06■□□□□ 0.96
TAF4O00268 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.06■□□□□ 0.96
TAF4O00268 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TAF4O00268 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TAF4O00268 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TAF4O00268 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms