Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AL162430.1-201ENST00000480705 870 ntBASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.08■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 KRT18P14-201ENST00000534205 1250 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L2-201ENST00000561772 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L6-201ENST00000626483 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L1-201ENST00000627662 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L8-201ENST00000629013 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L3-201ENST00000630187 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L7-201ENST00000630678 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DUX4L5-201ENST00000630834 1275 ntBASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 OR7E47P-201ENST00000546390 1422 ntBASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TERF1P2-201ENST00000583350 1212 ntBASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 C1orf229-201ENST00000623686 2258 ntBASIC20.06■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AC137767.1-201ENST00000602918 1920 ntBASIC20.04■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 LINC00526-201ENST00000581067 1875 ntBASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV11-1A0A0K0K1C0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV11-1A0A0K0K1C0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms