Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR4758-201ENST00000577688 71 ntBASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 AC010536.3-201ENST00000620306 533 ntBASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 AC138932.3-201ENST00000567634 1902 ntBASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 DUSP8P3-201ENST00000399571 1760 ntBASIC21.66■■□□□ 1.06
CCDC163A0A0D9SF12 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 AC138907.5-202ENST00000569484 235 ntBASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC163A0A0D9SF12 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 AC055733.4-201ENST00000638462 1354 ntBASIC21.64■■□□□ 1.06
CCDC163A0A0D9SF12 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 POU5F1P3-201ENST00000428824 1078 ntBASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 AC010141.2-201ENST00000452426 721 ntBASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 SLC7A5P1-201ENST00000568957 537 ntBASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 ITM2C-210ENST00000620962 501 ntBASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CCDC163A0A0D9SF12 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC163A0A0D9SF12 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 AC093827.2-201ENST00000512654 315 ntBASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 AC013268.1-206ENST00000638368 961 ntBASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 AC112229.1-201ENST00000639295 961 ntBASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC163A0A0D9SF12 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC163A0A0D9SF12 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 AC008687.6-201ENST00000596318 630 ntBASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC163A0A0D9SF12 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC163A0A0D9SF12 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms