Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 SMUG1P1-201ENST00000590640 811 ntBASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IGHV4-28A0A0C4DH34 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
IGHV4-28A0A0C4DH34 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 LINC02228-203ENST00000641970 1355 ntBASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC034268.1-201ENST00000441047 882 ntBASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IGHV4-28A0A0C4DH34 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 AL162430.1-201ENST00000480705 870 ntBASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV4-28A0A0C4DH34 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 CCDC92B-201ENST00000575506 885 ntBASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV4-28A0A0C4DH34 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 BX005040.4-201ENST00000637145 1518 ntBASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV4-28A0A0C4DH34 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 AC012676.1-201ENST00000574705 1949 ntBASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.6■□□□□ 0.09
IGHV4-28A0A0C4DH34 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms