Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
IGKV3D-20A0A0C4DH25 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.1■□□□□ 0.17
IGKV3D-20A0A0C4DH25 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGKV3D-20A0A0C4DH25 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGKV3D-20A0A0C4DH25 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
IGKV3D-20A0A0C4DH25 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IGKV3D-20A0A0C4DH25 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IGKV3D-20A0A0C4DH25 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.08■□□□□ 0.17
IGKV3D-20A0A0C4DH25 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IGKV3D-20A0A0C4DH25 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
IGKV3D-20A0A0C4DH25 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.08■□□□□ 0.17
IGKV3D-20A0A0C4DH25 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC005229.4-201ENST00000610085 2198 ntBASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 KRT8P33-201ENST00000508125 1423 ntBASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 YBX1P4-201ENST00000392794 808 ntBASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CA15P2-201ENST00000611168 834 ntBASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC004687.1-201ENST00000579003 1625 ntBASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IGKV3D-20A0A0C4DH25 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC244015.2-201ENST00000616358 1861 ntBASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-20A0A0C4DH25 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-20A0A0C4DH25 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms