Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 AC010525.1-201ENST00000585559 441 ntBASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV2A0A0B4J234 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV2A0A0B4J234 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TRAV2A0A0B4J234 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV2A0A0B4J234 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV2A0A0B4J234 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 AC079089.2-201ENST00000531211 1277 ntBASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 OXCT2P1-201ENST00000447263 1535 ntBASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV2A0A0B4J234 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 RASA4CP-201ENST00000424092 1398 ntBASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 AC091305.1-201ENST00000479476 895 ntBASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 AP001330.3-201ENST00000520123 633 ntBASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV2A0A0B4J234 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 AC242852.2-201ENST00000615738 1807 ntBASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 C9orf163-202ENST00000624034 2573 ntBASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 MIR939-201ENST00000401314 82 ntBASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 IGHV3-19-201ENST00000521488 291 ntBASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 AC126544.1-201ENST00000580842 1059 ntBASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV2A0A0B4J234 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 AC233723.2-201ENST00000623798 2106 ntBASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAV2A0A0B4J234 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV2A0A0B4J234 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV2A0A0B4J234 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV2A0A0B4J234 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV2A0A0B4J234 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms