Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC139530.1-201ENST00000575312 1977 ntBASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV8-3A0A0A6YYJ7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms