Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 DUX4L16-201ENST00000555130 1264 ntBASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 AC005181.1-201ENST00000604782 1256 ntBASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC187A0A096LP49 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC187A0A096LP49 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC187A0A096LP49 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC187A0A096LP49 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 TSPY6P-201ENST00000448518 926 ntBASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC187A0A096LP49 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 MYCNOS-205ENST00000641950 531 ntBASIC20.63■□□□□ 0.89
CCDC187A0A096LP49 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 SLC29A4P1-201ENST00000398760 971 ntBASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 AP001160.3-201ENST00000601484 763 ntBASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC187A0A096LP49 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 SLC7A5P2-201ENST00000553010 536 ntBASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC187A0A096LP49 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC187A0A096LP49 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 GUSBP6-202ENST00000438529 1198 ntBASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 KRT18P6-201ENST00000555540 1265 ntBASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC187A0A096LP49 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC187A0A096LP49 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms