Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 FKBP9P1-201ENST00000441699 1491 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 CSPG4P11-201ENST00000560634 4910 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 SLC3A1-207ENST00000409741 1537 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC011431.1-201ENST00000512971 230 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC087699.1-201ENST00000558111 393 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AP000892.2-201ENST00000613535 324 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC004233.4-201ENST00000621689 417 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC087163.3-201ENST00000624345 700 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC138761.4-202ENST00000577956 2552 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 RHBDL2-202ENST00000372990 1837 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 CICP5-201ENST00000424045 2215 ntBASIC13.31□□□□□ -0.28
PPP3CAQ08209 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC13.31□□□□□ -0.28
PPP3CAQ08209 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PPP3CAQ08209 AL445989.1-201ENST00000611641 1436 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AP000350.2-201ENST00000439492 1763 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 PMS2CL-202ENST00000403974 1529 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 RN7SKP90-201ENST00000363013 335 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 RN7SL105P-201ENST00000475661 299 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 RN7SL76P-201ENST00000482435 289 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 RN7SL452P-201ENST00000482923 291 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC090825.2-201ENST00000557959 739 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AP2S1-209ENST00000601498 898 ntTSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC092120.3-201ENST00000605168 568 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 AC137936.2-201ENST00000636329 620 ntBASIC13.3□□□□□ -0.28
PPP3CAQ08209 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 GRAMD1B-201ENST00000322282 2571 ntTSL 5 BASIC13.3□□□□□ -0.28
PPP3CAQ08209 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PPP3CAQ08209 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms