Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC139099.1-202ENST00000574098 2409 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 SEMA4D-213ENST00000455551 3594 ntTSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 OR2A9P-202ENST00000479102 1990 ntBASIC13□□□□□ -0.33
SLC1A1P43005 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 GDF9-207ENST00000624495 1799 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 LINC00473-204ENST00000584179 1717 ntTSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13□□□□□ -0.33
SLC1A1P43005 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 SLC22A8-205ENST00000535878 1387 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13□□□□□ -0.33
SLC1A1P43005 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 PTGER4P2-201ENST00000328411 252 ntBASIC13□□□□□ -0.33
SLC1A1P43005 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13□□□□□ -0.33
SLC1A1P43005 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13□□□□□ -0.33
SLC1A1P43005 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 AL356273.1-201ENST00000441261 1152 ntBASIC13□□□□□ -0.33
SLC1A1P43005 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 PTGER4P3-201ENST00000458150 252 ntBASIC13□□□□□ -0.33
SLC1A1P43005 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 AC079601.2-201ENST00000547729 775 ntBASIC13□□□□□ -0.33
SLC1A1P43005 AC079414.2-201ENST00000567157 1104 ntBASIC13□□□□□ -0.33
SLC1A1P43005 ANKRD26P1-203ENST00000569528 966 ntBASIC13□□□□□ -0.33
SLC1A1P43005 THY1-209ENST00000580275 578 ntTSL 3 BASIC13□□□□□ -0.33
SLC1A1P43005 AC013403.2-201ENST00000607659 480 ntBASIC13□□□□□ -0.33
SLC1A1P43005 AC112236.2-201ENST00000608402 845 ntBASIC13□□□□□ -0.33
SLC1A1P43005 HMGB1P24-201ENST00000611897 328 ntBASIC13□□□□□ -0.33
SLC1A1P43005 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC13□□□□□ -0.33
SLC1A1P43005 AC009084.3-201ENST00000623356 437 ntBASIC13□□□□□ -0.33
SLC1A1P43005 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SLC1A1P43005 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SLC1A1P43005 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC13□□□□□ -0.33
SLC1A1P43005 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 AL359918.1-201ENST00000451892 2720 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC106872.9-201ENST00000512437 1393 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC145098.2-201ENST00000623593 3026 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC092865.2-201ENST00000439409 971 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 AP000533.1-201ENST00000456143 1177 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 AK2-206ENST00000480134 811 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.99□□□□□ -0.33
SLC1A1P43005 ZNF503-AS1-202ENST00000524517 790 ntTSL 3 BASIC12.99□□□□□ -0.33
SLC1A1P43005 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC12.99□□□□□ -0.33
SLC1A1P43005 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC12.99□□□□□ -0.33
SLC1A1P43005 AC074052.1-201ENST00000567734 456 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.99□□□□□ -0.33
SLC1A1P43005 RN7SL341P-201ENST00000613745 298 ntBASIC12.99□□□□□ -0.33
SLC1A1P43005 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SLC1A1P43005 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms