Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC126564.1-201ENST00000623628 2013 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AL008628.1-201ENST00000564198 5187 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AL391903.1-201ENST00000407513 365 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 RN7SL363P-201ENST00000482412 273 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 BOLA3P2-201ENST00000586496 323 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC022001.3-201ENST00000606330 596 ntBASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
NPIPA3F8WFD2 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AL357054.1-201ENST00000407035 1227 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 PHBP11-201ENST00000420550 809 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC012066.1-201ENST00000439252 694 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AACSP1-202ENST00000521412 1095 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 OR5BA1P-201ENST00000529722 982 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 FP325317.1-201ENST00000539936 1042 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC103706.1-201ENST00000561761 679 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC106782.3-201ENST00000563429 258 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 OR3A1-202ENST00000615105 966 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AP006621.5-202ENST00000623692 636 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 AL731555.1-201ENST00000634547 1259 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 MPI-208ENST00000563786 1707 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 NBEAP3-201ENST00000420638 1493 ntBASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NPIPA3F8WFD2 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms