Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 HNRNPA1P19-201ENST00000405292 370 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 AC009237.11-201ENST00000425635 265 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 PPIEL-201ENST00000427240 813 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 KRT19P4-201ENST00000443208 943 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 AC018892.1-201ENST00000451098 265 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC13.07□□□□□ -0.32
SLC1A1P43005 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC13.07□□□□□ -0.32
SLC1A1P43005 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.07□□□□□ -0.32
SLC1A1P43005 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 PRR20FP-201ENST00000603320 180 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 AC012377.1-201ENST00000499797 2730 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 CLIP4-203ENST00000401617 2162 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 AL357140.3-201ENST00000639753 1983 ntBASIC13.07□□□□□ -0.32
SLC1A1P43005 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SLC1A1P43005 GSTM5-201ENST00000256593 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 AC097372.1-201ENST00000636502 2127 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 FKBP9P1-201ENST00000441699 1491 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SLC1A1P43005 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 FXNP2-201ENST00000411625 547 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 RBMX2P5-201ENST00000424312 969 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 PSMD4P1-201ENST00000433951 1109 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 AC010997.1-201ENST00000447646 350 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 AC106047.2-201ENST00000511723 743 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC13.06□□□□□ -0.32
SLC1A1P43005 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC13.06□□□□□ -0.32
SLC1A1P43005 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 AC015813.5-201ENST00000624641 1514 ntBASIC13.06□□□□□ -0.32
SLC1A1P43005 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 PRAMEF18-202ENST00000624297 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SLC1A1P43005 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SLC1A1P43005 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.06□□□□□ -0.32
SLC1A1P43005 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SLC1A1P43005 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.05□□□□□ -0.32
SLC1A1P43005 GNG12-AS1-203ENST00000420587 2232 ntTSL 2 BASIC13.05□□□□□ -0.32
SLC1A1P43005 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SLC1A1P43005 AP005242.4-201ENST00000623533 2529 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms