Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 HNRNPA1P50-201ENST00000546565 928 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01922-201ENST00000562582 719 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 IGHV3OR16-11-201ENST00000565524 349 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC013403.2-201ENST00000607659 480 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 HERC2P10-201ENST00000570209 2393 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 OSBPL9-207ENST00000462759 2755 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AL591499.1-201ENST00000307155 1153 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 RNA5SP407-201ENST00000410275 110 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AC007679.1-201ENST00000458609 502 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SNRPD2P2-201ENST00000473818 333 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SAA2-204ENST00000528349 948 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 CYP4F10P-201ENST00000589560 752 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AC245884.9-201ENST00000596631 483 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 KXD1-210ENST00000599000 498 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AL627230.2-201ENST00000613254 655 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 FURIN-208ENST00000640725 224 ntTSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 PPP1R26P5-201ENST00000416640 3664 ntBASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 C10orf128-201ENST00000374148 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 AC012377.1-201ENST00000499797 2730 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PRICKLE4Q2TBC4 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
PRICKLE4Q2TBC4 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PRICKLE4Q2TBC4 CASS4-201ENST00000360314 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
PRICKLE4Q2TBC4 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
PRICKLE4Q2TBC4 OR10G3-202ENST00000641040 2533 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms