Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC073585.1-201ENST00000368895 1328 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 ADGRE3-203ENST00000443157 1971 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CDC20P1-201ENST00000488829 1500 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AR-202ENST00000396043 1728 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC037459.3-201ENST00000521025 2750 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 MIR339-201ENST00000362153 94 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AL663070.1-201ENST00000438210 725 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC012100.1-201ENST00000470304 282 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC104066.1-201ENST00000512377 751 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AP000812.3-201ENST00000544535 609 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC233702.8-201ENST00000579239 965 ntTSL 3 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AC010503.4-201ENST00000615487 688 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AP000553.4-201ENST00000641967 471 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 AK7-201ENST00000267584 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 RPS6KA2-203ENST00000405189 2282 ntTSL 2 BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 LRRC37A7P-201ENST00000583900 2759 ntBASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PRICKLE4Q2TBC4 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 OR2A9P-202ENST00000479102 1990 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 NF2-207ENST00000397789 1857 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PGAM1P4-201ENST00000397343 750 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC006022.1-201ENST00000425261 388 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 RPL21P135-201ENST00000442539 791 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 RN7SL681P-201ENST00000482763 292 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC023906.1-201ENST00000486386 453 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC092910.2-201ENST00000491262 348 ntBASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 AC005355.1-201ENST00000513329 714 ntTSL 3 BASIC11.6□□□□□ -0.55
PRICKLE4Q2TBC4 ASS1P9-201ENST00000513426 1236 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms