Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COX11Q9Y6N1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 SLC6A10P-202ENST00000431994 2058 ntBASIC15.81■□□□□ 0.12
COX11Q9Y6N1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.81■□□□□ 0.12
COX11Q9Y6N1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.81■□□□□ 0.12
COX11Q9Y6N1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.8■□□□□ 0.12
COX11Q9Y6N1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 MIR4508-201ENST00000584178 70 ntBASIC15.79■□□□□ 0.12
COX11Q9Y6N1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 AC005229.4-201ENST00000610085 2198 ntBASIC15.79■□□□□ 0.12
COX11Q9Y6N1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COX11Q9Y6N1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 AC010980.1-201ENST00000587192 1142 ntBASIC15.78■□□□□ 0.12
COX11Q9Y6N1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COX11Q9Y6N1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COX11Q9Y6N1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COX11Q9Y6N1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COX11Q9Y6N1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COX11Q9Y6N1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COX11Q9Y6N1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COX11Q9Y6N1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
COX11Q9Y6N1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COX11Q9Y6N1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms