Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCH2Q9Y6C5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCH2Q9Y6C5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PTCH2Q9Y6C5 AL596275.1-201ENST00000423464 877 ntBASIC24.84■■□□□ 1.57
PTCH2Q9Y6C5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 AC135731.1-201ENST00000569415 2548 ntBASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 AC005224.4-201ENST00000583262 1652 ntBASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 AP001160.3-201ENST00000601484 763 ntBASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PTCH2Q9Y6C5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
PTCH2Q9Y6C5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.83■■□□□ 1.56
PTCH2Q9Y6C5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 GCSHP5-201ENST00000443090 522 ntBASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCH2Q9Y6C5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 OXCT2P1-201ENST00000447263 1535 ntBASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.81■■□□□ 1.56
PTCH2Q9Y6C5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 RARRES2P4-201ENST00000514074 484 ntBASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCH2Q9Y6C5 MIPEPP3-201ENST00000412105 444 ntBASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PTCH2Q9Y6C5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 AC010536.3-201ENST00000620306 533 ntBASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCH2Q9Y6C5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
PTCH2Q9Y6C5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCH2Q9Y6C5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 AL158047.1-201ENST00000445918 881 ntBASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PTCH2Q9Y6C5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms