Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HRH3Q9Y5N1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.02■□□□□ 0.8
HRH3Q9Y5N1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HRH3Q9Y5N1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.01■□□□□ 0.79
HRH3Q9Y5N1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 C1orf229-201ENST00000623686 2258 ntBASIC20■□□□□ 0.79
HRH3Q9Y5N1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HRH3Q9Y5N1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20■□□□□ 0.79
HRH3Q9Y5N1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.99■□□□□ 0.79
HRH3Q9Y5N1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 IGHV3-19-201ENST00000521488 291 ntBASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HRH3Q9Y5N1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HRH3Q9Y5N1 LINC01960-201ENST00000563759 1884 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms